Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005748.1 Hibiscus syriacus cultivar Beakdansim tig00013445_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65007

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4685--4768
13
7.2
12
71
24
56
28
2
39
29
1.69
4684--4798
35
3.2
36
92
3
189
28
1
40
29
1.67
7097--7173
17
4.7
17
68
20
56
6
14
5
74
1.20
17120--17162
23
1.9
21
81
13
50
32
18
13
34
1.90
22338--22394
11
4.8
12
73
25
50
3
15
1
78
0.96
22324--22394
13
5.6
13
77
9
67
4
15
2
77
1.04
22323--22394
31
2.3
30
81
13
83
4
16
2
76
1.06
22341--22394
23
2.3
25
75
12
60
3
14
1
79
0.95
22325--22392
16
4.1
16
68
20
50
4
16
2
76
1.07
34237--34279
16
2.7
16
89
7
61
0
20
0
79
0.74
34237--34275
11
3.6
11
86
6
53
0
20
0
79
0.73
39162--39197
19
1.9
18
88
5
54
38
13
5
41
1.68
39160--39213
21
2.7
20
82
5
65
38
12
9
38
1.76
41873--41904
16
2.0
16
100
0
64
31
18
6
43
1.75
46418--46467
19
2.5
19
87
6
64
24
8
0
68
1.16
60653--60716
27
2.3
28
76
10
69
6
15
15
62
1.51

Tables:   1

The End!