Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005752.1 Hibiscus syriacus cultivar Beakdansim tig00013456_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53773

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2993--3042
15
3.2
16
83
10
59
74
0
10
16
1.08
2975--3056
41
2.1
39
81
9
94
74
1
8
15
1.12
3026--3076
18
2.8
19
77
19
56
70
0
7
21
1.12
3003--3076
15
4.9
14
78
17
51
71
0
8
20
1.11
3273--3321
8
6.1
8
80
7
55
69
0
4
26
1.06
3270--3327
15
3.9
14
82
13
62
70
0
3
25
1.03
10456--10521
29
2.3
29
81
0
78
34
25
3
36
1.72
13605--13725
59
2.1
59
92
3
199
35
23
17
23
1.95
17112--17177
15
4.4
15
76
0
69
31
7
18
42
1.78
22728--22764
18
2.1
18
94
0
65
32
32
13
21
1.92
23061--23141
16
5.1
16
71
16
69
37
17
1
44
1.57
27677--27732
21
2.7
21
77
0
58
41
23
12
23
1.88
37363--37421
29
2.1
29
90
3
93
59
13
11
15
1.62
38834--38884
3
17.7
3
76
15
54
68
0
1
29
1.00
38836--38884
15
3.4
14
81
15
64
69
0
2
28
1.00
39282--39697
55
7.6
55
88
4
606
36
10
17
35
1.84
39282--39696
165
2.5
165
94
0
706
36
10
17
35
1.84
42195--42234
2
19.5
2
94
5
71
47
0
2
50
1.14
48401--48660
55
4.7
55
89
0
385
39
9
15
35
1.80
53404--53468
26
2.5
26
95
2
114
47
0
27
24
1.52

Tables:   1

The End!