Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005757.1 Hibiscus syriacus cultivar Beakdansim tig00013477_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74531

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1742--1799
28
2.1
28
83
6
73
58
3
12
25
1.49
2725--2823
9
11.7
9
67
18
52
63
2
1
33
1.12
2725--2776
23
2.2
24
83
10
72
67
1
0
30
1.02
2747--2806
18
3.6
18
72
18
58
63
3
0
33
1.11
11268--11321
24
2.2
24
86
0
72
35
0
33
31
1.58
20531--20634
29
3.6
29
88
0
109
19
37
29
13
1.90
20532--20648
58
2.0
58
83
0
144
20
35
32
11
1.88
20561--20648
29
3.0
29
94
0
149
21
32
36
9
1.85
20705--20734
15
2.0
15
100
0
60
26
26
40
6
1.81
20878--20962
29
2.9
29
83
0
107
12
29
40
17
1.87
21266--21295
12
2.5
12
94
0
51
63
3
0
33
1.11
23240--23335
50
1.9
50
93
0
165
42
29
6
21
1.77
23731--23864
15
8.5
15
76
9
106
0
28
14
56
1.43
23728--23864
33
4.4
31
83
7
152
0
29
13
56
1.43
28931--29321
186
2.1
185
92
1
642
45
8
3
41
1.54
48716--48753
18
2.2
18
90
4
60
68
5
2
23
1.23
52771--52796
12
2.2
12
100
0
52
50
19
7
23
1.73
52786--52876
43
2.1
45
93
4
159
56
13
3
27
1.53
53749--53790
17
2.5
17
82
17
52
9
7
4
78
1.08
61440--61513
30
2.5
30
76
8
78
27
17
14
40
1.89
61749--62303
93
6.0
92
80
4
515
35
9
16
38
1.81
61749--62290
188
2.9
185
79
5
531
35
8
16
38
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63755--63789
16
2.1
17
94
5
63
65
14
8
11
1.46
65298--65486
29
6.6
29
76
10
181
38
14
21
25
1.91

Tables:   1

The End!