Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000576.1 Hibiscus syriacus cultivar Beakdansim tig00001128_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58507

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2486--2533
2
24.5
2
95
4
89
52
0
0
47
1.00
6950--6990
2
20.5
2
100
0
82
48
0
0
51
1.00
9625--9744
3
40.3
3
90
1
188
35
3
0
61
1.12
10232--10282
25
2.1
25
85
7
70
68
5
21
3
1.27
11151--11184
12
2.9
12
95
4
61
44
0
0
55
0.99
11155--11194
11
3.5
11
89
3
53
52
0
0
47
1.00
11871--11918
18
2.7
18
78
9
55
25
0
2
72
0.95
23702--23938
84
2.8
84
98
0
458
26
13
21
37
1.91
24574--25355
113
6.9
113
91
4
1272
37
13
19
30
1.90
24574--25355
229
3.4
229
95
2
1366
37
13
19
30
1.90
25674--25801
3
42.7
3
92
0
211
34
3
0
62
1.11
26274--26325
24
2.1
25
86
10
72
69
5
21
3
1.26
27118--27166
19
2.7
18
87
9
73
16
4
6
73
1.19
27207--27241
12
2.8
13
91
8
56
42
0
0
57
0.99
28312--28358
16
2.8
17
77
6
51
65
4
4
25
1.29
30092--30223
66
2.0
66
100
0
264
39
10
15
34
1.82
33734--33773
3
13.0
3
85
15
55
35
0
0
65
0.93
33735--33791
10
5.8
10
82
17
59
35
0
0
64
0.93
33751--33815
15
4.3
15
75
14
53
32
1
0
66
1.01
33742--33815
24
3.2
24
83
11
84
32
1
0
66
1.00
33810--33843
10
3.4
10
92
8
52
20
8
2
67
1.31
35615--35653
16
2.5
16
91
4
62
30
2
5
61
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39616--39819
36
5.7
36
92
0
338
40
10
14
34
1.81
42866--42894
15
1.9
15
100
0
58
55
3
0
41
1.17
42890--42938
23
2.0
23
84
7
62
71
4
2
22
1.13
54164--54205
19
2.3
19
80
16
52
73
2
4
19
1.12
56003--56033
16
2.0
15
93
6
53
70
0
0
29
0.87
56001--56039
19
2.1
18
86
13
53
71
0
0
28
0.86
56006--56060
22
2.4
23
88
8
78
63
1
0
34
1.05
56391--56662
81
3.3
79
84
5
319
22
19
28
29
1.98
56663--56778
30
3.6
30
72
22
110
37
11
21
30
1.88
56697--56846
37
4.3
35
74
19
145
39
11
20
28
1.87
56667--56814
67
2.2
67
95
0
260
39
11
20
29
1.87
56783--56848
19
3.5
19
74
21
68
40
9
22
27
1.84
56936--57005
21
3.6
21
69
21
71
38
12
21
27
1.90
56920--57312
36
11.0
36
81
10
430
40
12
19
26
1.88
56948--57068
42
3.0
42
83
7
146
44
12
19
23
1.84
56839--57319
216
2.3
216
87
5
680
40
12
19
27
1.88
57497--57960
123
3.8
121
84
2
509
24
18
25
31
1.97
57497--57961
246
1.9
245
82
3
594
24
18
24
32
1.97
58169--58297
63
2.0
64
92
1
215
31
13
21
34
1.92
58180--58323
63
2.3
61
86
7
191
28
15
22
33
1.95

Tables:   1

The End!