Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005772.1 Hibiscus syriacus cultivar Beakdansim tig00013511_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58435

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16701--16851
37
4.1
37
84
2
180
45
25
3
26
1.69
16701--16857
73
2.2
73
84
2
199
45
24
4
26
1.72
26553--26606
26
2.0
27
82
10
67
66
3
5
24
1.29
31369--31548
90
2.0
90
98
0
351
34
18
16
30
1.93
34705--34758
23
2.2
25
90
6
85
66
3
14
14
1.38
34706--34748
11
3.8
11
75
6
50
72
2
11
13
1.22
34705--34758
25
2.3
23
87
12
74
66
3
14
14
1.38
36854--36891
20
1.9
20
88
0
58
31
2
2
63
1.22
38703--38771
22
3.3
22
82
11
74
62
0
0
37
0.96
38723--38853
22
5.8
22
70
16
81
52
3
0
42
1.24
38797--38850
20
2.6
21
82
8
67
53
1
0
44
1.11
38797--38854
21
2.8
21
85
15
84
51
1
0
46
1.11
38798--38875
21
3.7
21
77
14
79
46
3
1
48
1.28
38881--38906
2
13.0
2
100
0
52
50
0
0
50
1.00
40826--40913
42
2.1
41
85
6
124
12
21
17
48
1.79
50855--50891
6
6.0
6
87
6
56
81
0
0
18
0.70
50855--50891
13
2.9
13
92
4
58
81
0
0
18
0.70
52195--52258
28
2.3
27
81
7
67
46
7
0
45
1.32
52266--52325
26
2.3
26
85
2
84
45
5
0
50
1.23

Tables:   1

The End!