Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005773.1 Hibiscus syriacus cultivar Beakdansim tig00013512_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97723

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26936--26963
2
14.0
2
100
0
56
50
0
0
50
1.00
34158--34200
21
2.0
22
81
4
52
25
0
20
53
1.46
46833--46894
30
2.0
31
93
3
108
22
4
35
37
1.76
50754--50803
14
3.5
15
86
5
68
26
16
30
28
1.96
55084--55123
21
1.9
21
89
0
62
10
25
40
25
1.86
63162--63202
19
2.2
19
83
16
50
48
14
0
36
1.44
63497--63542
19
2.4
19
96
0
83
43
4
26
26
1.73
63655--63717
20
2.9
21
79
9
65
15
25
34
23
1.95
66848--66880
14
2.4
14
94
0
57
42
21
6
30
1.77
69166--69256
34
2.7
34
98
0
173
24
30
17
27
1.97
69471--69510
21
1.9
22
90
10
66
12
10
40
37
1.77
69538--69580
21
2.0
21
95
0
77
27
27
20
23
1.99
69616--69654
20
2.0
20
100
0
78
15
25
46
12
1.81
69713--69742
15
2.0
15
93
0
51
16
26
30
26
1.97
69692--69769
21
4.1
20
78
18
85
14
28
34
23
1.93
69859--69919
31
2.0
31
93
3
106
40
19
6
32
1.77
70079--70126
23
2.1
23
96
0
87
33
2
8
56
1.41
72112--72202
34
2.7
34
96
0
164
25
30
17
26
1.97
72417--72456
21
1.9
22
90
10
66
12
10
40
37
1.77
72484--72526
21
2.0
21
95
0
77
27
27
20
23
1.99
72562--72605
21
2.1
21
100
0
88
13
27
45
13
1.81
72639--72703
22
3.0
22
86
6
98
13
26
38
21
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72793--72853
31
2.0
31
93
3
106
40
19
6
32
1.77
84778--84809
13
2.5
13
95
5
57
34
0
0
65
0.93
85434--85497
31
2.1
31
93
0
110
42
6
12
39
1.68
85561--85612
22
2.2
25
86
10
74
59
1
0
38
1.08
88026--88098
18
3.9
18
82
7
101
28
31
19
20
1.97
93977--94049
18
3.9
18
72
13
76
31
30
20
17
1.96
94151--94205
21
2.7
20
80
11
58
38
18
1
41
1.61

Tables:   1

The End!