Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005775.1 Hibiscus syriacus cultivar Beakdansim tig00013514_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75010

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1366--1390
2
12.5
2
100
0
50
48
0
0
52
1.00
2275--2300
13
2.0
13
100
0
52
30
7
15
46
1.74
5818--5889
32
2.2
33
78
7
85
15
30
30
23
1.95
10812--10863
18
2.8
18
76
2
50
46
5
0
48
1.26
10925--10986
24
2.6
24
81
0
61
61
3
4
30
1.33
28312--28338
14
1.9
14
100
0
54
18
0
0
81
0.69
29847--29882
12
2.9
12
88
8
54
72
2
0
25
0.98
45220--45265
23
2.0
24
91
8
78
36
17
4
41
1.69
45402--45462
31
2.1
30
84
9
81
27
8
6
57
1.53
48530--48685
75
2.1
75
80
4
172
26
16
23
33
1.95
48766--49215
75
6.1
75
75
9
295
26
16
26
30
1.97
48878--49215
150
2.3
145
80
9
364
26
17
25
30
1.97
51944--51994
23
2.3
22
83
6
59
35
7
17
39
1.79
65872--65942
18
4.1
18
70
17
51
49
15
0
35
1.45
68604--68642
10
3.9
10
93
0
60
35
20
0
43
1.52
68684--68724
18
2.3
18
91
4
66
29
4
2
63
1.28

Tables:   1

The End!