Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005776.1 Hibiscus syriacus cultivar Beakdansim tig00013521_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84808

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4053--4120
33
2.1
33
83
8
86
32
1
35
30
1.67
11505--11559
19
2.9
19
86
5
67
43
12
9
34
1.74
20740--20782
23
1.9
21
81
13
50
32
18
13
34
1.90
23628--23657
13
2.4
13
94
5
53
26
30
0
43
1.55
26111--26162
19
2.6
21
90
6
81
46
5
13
34
1.67
28259--28300
14
3.2
13
80
12
50
0
16
2
80
0.81
28267--28300
16
2.1
16
89
10
52
0
14
2
82
0.79
39568--39614
17
2.6
17
87
12
60
61
0
12
25
1.31
41749--41785
19
2.0
18
89
5
56
0
18
2
78
0.87
46615--46649
6
5.7
6
86
6
52
0
14
2
82
0.77
46615--46649
13
2.8
12
87
8
52
0
14
2
82
0.77
46855--46887
15
2.2
15
94
0
57
57
0
27
15
1.38
51411--51457
14
3.1
14
82
11
58
0
21
0
78
0.75
51420--51460
9
4.4
9
90
6
64
0
19
0
80
0.71
51411--51454
23
1.9
23
90
9
72
0
20
0
79
0.73
51812--51895
35
2.4
36
90
4
127
29
3
36
29
1.74
53410--53453
20
2.2
20
84
8
54
65
0
13
20
1.26
53858--53909
19
2.6
20
87
6
70
42
5
15
36
1.71
57188--57234
19
2.5
18
80
16
51
2
17
2
78
0.94
57941--57992
19
2.6
20
87
6
70
42
5
15
36
1.71
80761--80800
19
2.0
20
90
4
64
20
15
0
65
1.28

Tables:   1

The End!