Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005778.1 Hibiscus syriacus cultivar Beakdansim tig00013525_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69301

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--374
173
2.0
174
84
10
463
46
9
3
40
1.53
11629--11672
22
2.0
22
82
8
54
36
4
2
56
1.32
21913--21950
18
2.1
18
100
0
76
26
31
18
23
1.97
33874--33931
27
2.1
28
84
9
75
46
13
17
22
1.83
34014--34059
12
3.6
12
81
16
56
45
17
19
17
1.85
34020--34060
12
3.1
13
80
19
57
46
14
17
21
1.84
36356--36395
21
1.9
21
94
0
71
30
15
7
47
1.72
36390--36488
33
3.0
33
94
1
164
32
7
15
45
1.73
36474--36528
13
4.2
13
75
13
58
36
3
10
49
1.56
36724--36780
21
2.7
21
91
0
96
19
26
26
28
1.99
36954--37001
15
3.1
15
80
11
60
29
12
14
43
1.82
36965--36998
18
1.9
18
94
5
61
38
11
11
38
1.79
37092--37123
16
2.0
17
88
11
50
43
21
21
12
1.86
41554--41850
117
2.6
115
97
1
549
29
10
17
42
1.83
43141--43206
18
3.6
19
80
15
77
12
36
12
39
1.80
54229--54369
64
2.2
63
82
5
158
36
18
18
26
1.94
55764--55830
22
3.1
22
84
2
91
29
23
22
23
1.99
64191--64235
18
2.5
19
92
7
76
11
8
0
80
0.92
64855--64895
21
1.9
22
85
5
57
34
2
9
53
1.47

Tables:   1

The End!