Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005780.1 Hibiscus syriacus cultivar Beakdansim tig00013534_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57489

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4507--4561
22
2.4
23
84
6
76
27
3
34
34
1.74
4529--4611
36
2.3
36
95
0
148
28
3
36
31
1.75
4959--4998
18
2.2
18
95
0
71
22
5
47
25
1.71
6746--6804
23
2.5
24
83
5
86
64
10
16
8
1.48
11795--11899
36
2.9
36
92
1
176
30
35
4
29
1.78
12503--12554
15
3.4
15
75
15
52
15
17
0
67
1.24
19583--19626
22
2.0
22
100
0
88
31
36
4
27
1.77
20663--20731
33
2.1
33
83
5
86
31
1
36
30
1.67
20717--20781
13
5.4
12
75
21
57
29
3
35
32
1.73
20702--20812
36
3.1
36
90
1
161
27
3
35
34
1.74
26398--26467
33
2.1
33
84
5
88
31
1
32
34
1.67
26452--26516
13
5.4
12
75
21
57
29
3
35
32
1.73
26421--26549
36
3.7
35
86
6
163
30
3
34
31
1.73
32483--32538
28
2.1
25
83
9
67
8
16
16
58
1.61
46096--46127
16
2.0
16
100
0
64
31
18
6
43
1.75
47242--47281
19
2.0
20
90
4
64
25
10
0
65
1.24
50137--50181
19
2.3
20
85
14
60
24
11
0
64
1.26

Tables:   1

The End!