Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005785.1 Hibiscus syriacus cultivar Beakdansim tig00013555_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46439

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5807--5874
23
3.0
22
80
4
73
22
22
20
35
1.96
10258--10684
72
5.9
70
77
10
376
26
20
11
41
1.86
10267--10684
147
2.9
145
79
8
372
27
20
10
41
1.86
11529--11572
3
14.3
3
90
4
70
34
0
2
63
1.07
11687--11733
20
2.3
20
82
7
51
36
6
2
55
1.37
11700--11748
3
17.3
3
76
19
52
32
4
0
63
1.13
11700--11745
20
2.4
19
88
3
65
32
4
0
63
1.14
14045--14083
5
7.8
5
83
11
53
58
0
5
35
1.20
16462--16494
17
2.0
17
88
5
50
9
24
0
66
1.20
19163--19256
36
2.6
36
96
0
179
34
12
12
40
1.82
21085--21134
24
2.2
22
85
7
64
76
2
4
18
1.04
21165--21244
2
42.0
2
76
14
53
56
2
0
41
1.13
21132--21216
32
2.7
31
77
10
84
56
1
1
41
1.14
21607--21655
25
2.0
25
100
0
98
36
16
4
42
1.67
24259--24290
2
16.0
2
100
0
64
50
0
0
50
1.00
31147--31227
3
27.0
3
87
0
117
60
0
0
39
0.97
31462--32207
113
6.7
113
91
1
1008
28
19
14
37
1.91
33055--33360
83
3.7
83
99
0
594
38
21
13
26
1.90
32966--33360
166
2.3
172
92
3
640
37
22
13
26
1.91
34507--34555
9
5.6
8
81
13
53
0
16
0
83
0.64
34508--34556
13
3.7
13
80
20
57
0
16
0
83
0.64
34521--34555
10
3.4
10
84
7
52
0
17
0
82
0.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34507--34555
21
2.2
23
89
7
75
0
16
0
83
0.64
34507--34556
23
2.2
23
86
10
68
0
16
0
84
0.63
45190--45239
23
2.1
24
85
3
66
64
2
6
28
1.28

Tables:   1

The End!