Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005789.1 Hibiscus syriacus cultivar Beakdansim tig00013566_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62314

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1720--1841
49
2.5
49
84
6
151
24
11
11
52
1.70
1692--1928
50
4.8
50
76
12
215
26
11
13
48
1.77
28733--28772
2
20.5
2
89
5
64
50
2
0
47
1.14
33449--33519
31
2.3
31
97
0
133
33
14
8
43
1.75
34465--34498
2
18.0
2
88
11
54
0
50
0
50
1.00
35938--35970
2
16.5
2
100
0
66
51
0
0
48
1.00
36860--36915
23
2.4
23
84
0
76
55
14
14
16
1.70
46436--46504
18
3.7
18
77
20
63
43
1
1
53
1.18
47940--48076
60
2.3
60
81
5
161
30
17
16
35
1.92
50149--50187
2
19.5
2
100
0
78
51
0
0
48
1.00
51086--51126
21
2.0
21
85
0
55
19
21
31
26
1.97
57415--57530
60
1.9
60
85
0
160
34
16
15
33
1.90
58027--58095
33
2.1
34
88
2
104
42
13
5
39
1.68
58484--58523
8
5.1
8
84
6
55
57
0
0
42
0.98

Tables:   1

The End!