Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000579.1 Hibiscus syriacus cultivar Beakdansim tig00001131_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105151

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9874--9951
39
2.0
39
94
0
138
48
15
10
25
1.76
17227--17254
5
5.6
5
100
0
56
64
0
35
0
0.94
17209--17257
12
3.8
12
82
15
62
63
0
36
0
0.95
19071--19108
2
19.0
2
100
0
76
50
0
0
50
1.00
35818--35877
30
2.0
31
81
15
72
45
8
16
30
1.77
37207--37267
22
2.8
22
89
0
95
29
22
24
22
1.99
42712--42764
17
3.1
18
76
13
58
56
0
3
39
1.17
52548--52626
32
2.6
31
86
6
108
21
21
36
20
1.95
52822--52891
27
2.4
29
93
6
117
34
0
24
41
1.55
53148--53179
13
2.4
14
85
15
50
59
0
0
40
0.97
53210--53817
274
2.2
279
88
3
913
31
9
21
37
1.86
53840--53953
56
2.0
56
94
0
201
33
28
8
29
1.87
54637--54706
27
2.5
27
86
11
88
42
20
0
37
1.52
54902--54980
32
2.6
31
88
6
117
20
37
21
20
1.94
57237--57307
29
2.4
30
79
13
76
26
7
15
50
1.69
59880--59923
22
2.0
22
86
0
61
20
6
13
59
1.57
60760--61122
184
2.0
184
97
0
690
25
16
20
36
1.94
62313--62423
58
1.9
58
81
7
136
33
16
4
45
1.67
62970--63163
97
2.0
97
89
2
300
38
15
9
36
1.81
73518--73556
19
2.1
19
100
0
78
23
30
5
41
1.76
83956--84018
27
2.4
27
81
7
76
46
6
4
42
1.50

Tables:   1

The End!