Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005792.1 Hibiscus syriacus cultivar Beakdansim tig00013580_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55125

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4582--4615
17
2.1
16
89
10
52
64
0
2
32
1.08
5241--5285
19
2.4
19
100
0
90
33
24
33
8
1.86
5713--6145
216
2.0
214
92
4
728
24
12
19
43
1.86
6134--6208
33
2.3
33
92
0
132
21
14
26
37
1.92
10198--10243
23
2.0
23
83
8
58
54
2
2
41
1.25
13110--13155
23
2.0
22
84
12
58
43
2
0
54
1.12
13458--13519
28
2.2
28
100
0
124
32
35
16
16
1.91
18228--18283
27
2.1
27
100
0
112
35
32
16
16
1.90
18284--18341
26
2.1
26
81
9
62
62
0
1
36
1.06
19170--20074
269
3.4
267
82
5
995
30
22
14
31
1.94
20063--20110
18
2.7
18
96
0
87
39
14
25
20
1.91
24388--24419
16
1.9
17
93
6
57
18
3
0
78
0.89
24724--24781
28
2.0
29
83
9
75
62
6
5
25
1.42
34395--34438
21
2.1
21
91
0
70
29
20
9
40
1.83
49050--49091
16
2.4
18
80
11
52
54
9
19
16
1.69
51604--51634
2
15.5
2
100
0
62
48
0
0
51
1.00
51932--51967
2
18.0
2
100
0
72
50
0
50
0
1.00

Tables:   1

The End!