Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005797.1 Hibiscus syriacus cultivar Beakdansim tig00013588_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56310

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4769--4793
8
3.1
8
100
0
50
88
0
12
0
0.53
6352--6486
51
2.6
52
90
2
220
39
19
21
20
1.93
7654--7735
42
2.0
42
90
0
128
23
21
20
34
1.97
7568--8432
249
3.5
249
93
0
1487
30
17
17
34
1.93
8152--8233
42
2.0
42
90
0
128
21
20
21
35
1.96
8572--8667
48
2.0
46
90
4
147
31
21
18
28
1.97
8983--9028
20
2.3
20
100
0
92
52
8
17
21
1.71
9891--9935
19
2.2
21
77
18
51
15
13
2
68
1.30
10086--10144
23
2.5
24
78
15
61
23
1
3
71
1.11
12779--12917
66
2.1
67
87
1
199
22
17
19
40
1.92
13536--13589
20
2.7
19
88
8
81
53
18
18
9
1.70
13624--13857
20
11.4
20
88
5
261
35
17
25
21
1.95
13602--13859
63
4.1
61
84
5
268
35
17
25
21
1.95
13967--14079
6
19.5
6
99
0
198
30
52
16
0
1.45
14776--14856
6
13.5
6
94
0
144
2
14
49
33
1.57
14944--15241
20
14.6
20
78
5
175
20
21
18
39
1.92
14946--15137
40
4.7
40
82
5
240
22
23
16
36
1.94
14954--15138
83
2.2
83
96
0
334
23
24
16
36
1.94
19029--19062
17
2.0
17
88
11
52
38
0
0
61
0.96
19030--19063
11
3.0
11
87
8
50
41
0
0
58
0.98
19432--19473
21
1.9
23
85
9
61
47
0
0
52
1.00
19471--19542
37
2.0
36
83
8
92
63
2
2
30
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19669--19696
6
4.7
6
100
0
56
17
0
0
82
0.68
19669--19711
18
2.4
18
84
0
50
23
2
0
74
0.93
27789--28180
191
2.1
188
87
4
565
45
9
6
38
1.62
33373--33409
2
18.5
2
100
0
74
51
0
0
48
1.00
36410--36471
23
2.9
21
85
7
81
20
35
25
17
1.95
36453--36492
21
1.9
21
89
0
62
25
40
25
10
1.86
40191--40237
21
2.2
22
88
3
69
48
10
10
29
1.71
40197--40250
21
2.8
19
84
13
74
51
9
9
29
1.65
43180--43217
20
1.9
20
88
0
58
23
18
34
23
1.96
43237--43326
20
4.8
20
72
13
73
27
20
30
22
1.98
43238--43305
35
1.9
35
87
0
100
27
22
29
20
1.98
45110--45290
88
2.1
88
88
2
265
45
8
6
39
1.60
45699--45759
27
2.3
26
83
8
70
32
4
8
54
1.52
47318--47361
14
3.1
14
77
6
52
45
13
6
34
1.70
48792--48840
21
2.4
21
90
10
75
40
6
10
42
1.63

Tables:   1

The End!