Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005802.1 Hibiscus syriacus cultivar Beakdansim tig00013607_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66179

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14591--14642
16
3.2
17
72
22
58
42
0
19
38
1.51
15113--15174
30
2.1
29
85
11
81
14
9
11
64
1.49
16630--16692
30
2.1
30
100
0
126
19
9
49
22
1.76
22580--22631
13
3.7
15
69
25
51
40
0
3
55
1.18
25019--25068
19
2.6
20
72
15
52
38
0
14
48
1.44
25254--25308
28
1.9
28
85
10
76
49
5
1
43
1.36
34651--34724
23
3.2
23
82
3
94
13
10
16
59
1.61
34650--34767
24
5.0
23
78
3
101
13
11
16
58
1.63
36467--36532
34
1.9
35
84
9
91
43
3
3
50
1.33
40017--40074
30
2.0
27
83
9
71
41
1
1
55
1.20
41065--41128
2
32.0
2
100
0
128
50
0
0
50
1.00
44324--44357
17
1.9
18
88
5
52
64
5
0
29
1.17
50800--50839
20
2.0
21
90
5
64
20
37
25
17
1.94
55801--55861
29
2.1
28
84
3
77
39
1
3
55
1.26
58630--58720
46
2.0
46
91
0
146
36
28
7
27
1.84
64918--64969
17
2.7
19
75
24
56
34
7
9
48
1.65

Tables:   1

The End!