Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005804.1 Hibiscus syriacus cultivar Beakdansim tig00013610_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25159

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
294--439
29
5.1
29
90
1
177
23
39
23
13
1.91
474--534
32
1.9
32
96
0
113
14
31
27
26
1.95
524--566
22
1.9
23
90
4
70
25
20
27
25
1.99
1001--1099
44
2.2
46
80
10
114
41
2
8
48
1.44
4496--4583
21
4.3
21
65
13
58
42
0
14
43
1.46
4490--5046
48
10.1
59
80
16
655
41
0
12
45
1.43
4611--5186
48
11.3
49
79
16
561
41
0
11
46
1.42
4705--4731
10
2.7
10
100
0
54
40
0
18
40
1.51
4657--5046
59
7.1
59
79
16
448
41
0
12
45
1.43
4798--4887
21
4.4
20
67
24
64
41
1
12
45
1.49
4950--5025
22
3.3
21
66
26
55
42
0
9
48
1.35
5138--5175
20
1.9
20
84
10
51
42
0
5
52
1.24
5158--5205
14
3.6
14
81
16
66
35
0
16
47
1.47
5158--5206
25
2.0
25
95
0
89
36
0
16
46
1.47
4886--5188
140
2.2
140
88
7
436
42
0
11
46
1.39
7904--7964
26
2.3
27
88
5
88
6
37
8
47
1.59
8226--8307
29
2.8
29
83
0
101
15
20
40
23
1.91
8685--11068
4
596.8
4
91
0
3288
43
24
6
25
1.77
11607--11811
103
2.0
100
93
2
347
38
2
13
44
1.59
12124--12209
12
6.6
13
69
19
56
47
0
2
50
1.14
20507--20538
16
2.0
16
100
0
64
37
12
31
18
1.88

Tables:   1

The End!