Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005808.1 Hibiscus syriacus cultivar Beakdansim tig00013618_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67879

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6122--6167
23
2.0
23
91
0
74
26
17
10
45
1.81
6526--6583
23
2.5
23
82
0
71
56
5
3
34
1.38
7420--7464
21
2.1
21
87
0
63
31
28
24
15
1.96
8445--8513
31
2.2
31
87
5
95
23
20
21
34
1.96
8495--8594
30
3.3
30
90
2
139
21
21
26
32
1.98
9998--10645
324
2.0
324
100
0
1296
35
6
25
31
1.82
12125--12169
21
2.1
21
87
0
63
31
28
24
15
1.96
12645--12673
2
14.5
2
100
0
58
51
0
0
48
1.00
13169--13246
31
2.5
31
85
4
95
21
20
23
34
1.97
13192--13306
30
3.8
30
88
2
124
20
20
25
33
1.97
13219--13318
30
3.3
30
90
2
139
21
21
26
32
1.98
15186--15240
27
2.0
27
93
6
94
38
10
0
50
1.37
16538--16657
50
2.4
50
77
5
143
16
35
25
21
1.94
16779--16819
10
4.1
10
84
12
57
31
29
0
39
1.57
16952--17276
111
2.9
111
96
0
596
36
7
11
44
1.68
22921--23046
51
2.5
51
81
10
141
22
27
33
16
1.95
25089--25129
22
1.9
22
90
5
66
68
0
0
31
0.90
27862--27924
31
2.0
31
81
0
72
31
7
12
47
1.70
36594--36686
20
4.7
20
74
15
93
40
20
18
20
1.91
37055--37084
14
2.1
14
100
0
60
0
6
13
80
0.91
38858--38907
21
2.4
21
86
0
73
20
16
30
34
1.94
39301--39377
21
3.7
21
76
13
77
25
36
18
19
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40882--40927
20
2.3
20
88
0
74
34
21
21
21
1.97
40935--40973
20
2.0
20
94
0
69
15
20
20
43
1.88
41010--41046
18
2.1
18
89
0
56
51
10
5
32
1.60
41002--41054
24
2.2
24
89
0
79
47
13
5
33
1.66
41432--41481
25
2.0
25
96
0
91
44
22
8
26
1.80
41587--41633
20
2.3
20
92
0
76
14
19
25
40
1.90
41925--41959
6
5.8
6
86
0
52
17
2
20
60
1.49
41918--41958
18
2.3
18
95
0
73
17
2
24
56
1.53
45143--45314
20
8.6
20
68
18
92
27
15
23
33
1.95
45143--45212
19
3.6
19
79
12
72
28
14
21
35
1.92
45203--45269
21
3.2
21
68
4
64
29
16
25
28
1.97
45156--45296
41
3.5
41
88
3
189
28
16
21
33
1.95
50935--51013
13
6.5
13
67
12
51
60
2
1
35
1.18
57813--57866
23
2.4
23
87
3
83
18
24
35
22
1.96
67209--67248
20
2.0
20
100
0
80
35
15
15
35
1.88

Tables:   1

The End!