Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000581.1 Hibiscus syriacus cultivar Beakdansim tig00001134_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72504

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
492--530
18
2.2
19
86
9
55
17
5
5
71
1.23
4212--4255
18
2.4
18
84
3
52
61
9
15
13
1.56
5445--5476
16
2.0
16
100
0
64
37
6
43
12
1.68
5940--5982
18
2.4
19
84
7
54
18
6
4
69
1.29
7554--7602
18
2.8
17
93
3
80
65
0
0
34
0.93
7555--7610
17
3.2
17
92
2
85
64
0
0
35
0.94
18304--18388
36
2.3
38
82
9
106
57
1
2
38
1.19
18637--18687
23
2.2
23
89
0
75
39
23
23
13
1.91
29078--29171
31
3.0
31
89
3
136
36
23
20
20
1.95
29953--29997
21
2.1
21
84
8
56
17
24
26
31
1.97
38869--38894
9
2.9
9
100
0
52
11
0
0
88
0.52
43505--43558
27
2.0
27
92
3
92
42
3
5
48
1.44
44967--45013
24
1.9
25
95
4
87
17
23
12
46
1.82
46085--46145
23
2.7
23
81
0
86
27
26
26
19
1.99
46368--46426
31
1.9
31
86
10
86
33
25
3
37
1.73
48189--48425
99
2.4
99
87
0
341
32
24
13
29
1.94
48589--48769
91
2.0
91
91
0
290
27
13
24
34
1.93

Tables:   1

The End!