Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005817.1 Hibiscus syriacus cultivar Beakdansim tig00013631_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46759

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
687--715
2
14.5
2
100
0
58
51
0
0
48
1.00
1871--1898
13
2.2
13
100
0
56
50
14
14
21
1.78
5205--5249
19
2.3
19
88
3
63
40
26
15
17
1.90
5369--5419
22
2.3
22
96
0
93
21
43
13
21
1.87
5632--5663
13
2.5
13
100
0
64
0
6
15
78
0.95
5692--5732
19
2.2
19
90
0
64
43
24
19
12
1.85
7891--7989
21
4.7
22
75
13
91
25
35
18
21
1.95
7891--7988
42
2.3
43
81
15
132
25
35
17
21
1.95
7891--8008
21
5.7
21
76
11
77
24
35
18
21
1.95
10016--10067
11
4.5
11
77
13
59
44
11
9
34
1.73
10027--10082
25
2.2
25
93
0
94
42
17
8
30
1.80
10187--10225
20
2.0
20
94
0
69
20
12
25
41
1.88
10551--10586
18
2.0
18
94
0
63
16
2
22
58
1.51
12979--13012
12
2.8
12
90
0
50
14
0
29
55
1.40
13700--13807
38
2.8
38
90
2
128
31
10
21
37
1.87
13723--13807
19
4.5
19
96
0
161
31
9
21
37
1.85
13795--13861
20
3.3
20
85
0
98
16
14
26
41
1.87
13795--13882
40
2.2
39
88
8
124
19
15
26
38
1.92
16229--16285
29
2.0
29
100
0
114
14
35
31
19
1.91
16296--16320
12
2.1
12
100
0
50
40
8
36
16
1.77
16349--16404
29
1.9
29
96
0
103
12
33
30
23
1.92
16431--16501
23
3.2
23
80
9
69
11
33
28
26
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16489--16516
14
2.0
14
100
0
56
7
28
42
21
1.79
16469--16502
10
3.4
10
84
15
52
8
29
38
23
1.85
20341--20365
13
1.9
13
100
0
50
32
28
8
32
1.86
22095--22242
66
2.2
67
81
4
183
25
16
18
40
1.90
31066--31121
28
2.0
28
100
0
112
21
21
7
50
1.72
31691--31756
32
2.0
33
91
2
107
28
15
15
40
1.87
39512--39683
57
3.0
56
78
12
197
39
15
15
29
1.89
40807--40883
29
2.6
29
85
2
109
24
2
5
67
1.24
41001--41067
27
2.4
27
85
2
80
37
5
0
56
1.24
41126--41223
33
2.9
34
78
7
119
53
0
4
42
1.20
41281--41357
29
2.7
29
83
4
84
67
3
3
24
1.25
41295--41357
29
2.1
30
91
2
101
68
3
3
25
1.19
43633--43699
25
2.6
26
79
11
75
56
0
4
38
1.19

Tables:   1

The End!