Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005822.1 Hibiscus syriacus cultivar Beakdansim tig00013642_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39411

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15382--15470
7
12.7
7
75
0
79
22
2
34
40
1.67
15386--15446
28
2.2
28
90
0
95
22
3
34
39
1.71
16422--16526
29
3.6
28
81
12
113
21
19
7
51
1.71
16441--16526
30
2.9
30
87
5
122
20
18
8
52
1.71
18299--18455
64
2.5
64
82
6
176
33
20
17
28
1.96
18775--18810
18
2.0
18
88
0
54
30
8
16
44
1.77
19920--19989
18
3.7
18
80
14
86
20
24
31
24
1.98
21842--21872
16
1.9
16
100
0
62
45
19
16
19
1.86
24880--24996
29
4.0
29
84
2
135
46
17
5
31
1.70
32398--32588
29
6.6
29
77
8
140
43
18
4
33
1.69
32423--32587
29
5.8
28
78
7
154
43
19
4
32
1.72
33887--33938
26
2.0
26
96
0
95
44
7
5
42
1.57
37294--37349
12
4.7
12
86
6
78
26
37
0
35
1.57
37293--37349
24
2.4
23
85
8
87
26
36
0
36
1.57

Tables:   1

The End!