Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005823.1 Hibiscus syriacus cultivar Beakdansim tig00013643_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58723

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
313--359
21
2.5
20
83
16
64
63
14
10
10
1.51
7133--7179
21
2.3
21
85
10
62
53
2
6
38
1.39
31576--31645
33
2.1
33
94
0
122
40
0
32
27
1.57
31589--31649
17
3.7
17
70
14
56
44
0
32
22
1.54
36170--36197
14
2.0
14
100
0
56
21
42
0
35
1.53
36659--36726
30
2.3
30
82
10
86
67
7
17
7
1.38
41400--41467
33
2.1
33
94
0
118
39
0
30
29
1.57
41488--41523
14
2.6
14
91
4
56
27
0
47
25
1.52
41488--41526
13
2.9
13
85
7
51
33
0
43
23
1.54
47527--47598
35
2.1
35
86
2
101
44
6
13
34
1.71
47527--47598
17
4.2
17
82
3
90
44
6
13
34
1.71
48411--48447
14
2.7
14
91
4
58
32
0
45
21
1.52
52188--52238
5
9.8
5
76
23
52
3
15
3
76
1.08
55262--55310
15
3.2
15
78
13
55
16
18
0
65
1.28

Tables:   1

The End!