Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005825.1 Hibiscus syriacus cultivar Beakdansim tig00013647_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82724

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2866--2907
16
2.6
16
96
0
75
16
9
4
69
1.33
11833--11873
6
7.0
6
83
5
57
80
0
14
4
0.87
12108--12133
2
13.0
2
100
0
52
0
50
0
50
1.00
14024--14094
26
2.8
24
82
10
79
40
1
19
38
1.61
28099--28139
2
20.5
2
100
0
82
51
0
0
48
1.00
28296--28338
13
3.3
13
83
6
52
37
13
20
27
1.91
28304--28346
13
3.3
13
90
0
68
32
18
20
27
1.96
30103--33091
597
5.0
598
98
0
5718
41
12
12
33
1.81
38846--38877
10
3.1
10
91
8
55
43
0
0
56
0.99
38846--38878
11
3.1
11
95
4
59
45
0
0
54
0.99
40425--40476
21
2.3
23
87
6
72
34
5
0
59
1.21
40425--40477
23
2.4
21
87
6
70
33
5
0
60
1.20
42069--42164
33
2.9
33
92
1
156
25
15
22
36
1.94
46643--46708
33
2.0
34
90
3
107
25
13
24
36
1.92
62746--62881
59
2.3
59
81
7
152
35
15
15
33
1.89
65836--65890
20
2.9
19
82
10
69
63
0
34
1
1.05
65864--65911
4
11.8
4
78
12
53
68
0
29
2
1.01
69019--69077
26
2.3
26
90
0
91
47
6
16
28
1.72
74811--74865
20
2.8
20
86
8
76
30
14
10
43
1.80
77148--77193
21
2.2
21
84
0
56
41
2
10
45
1.51
77184--77243
31
1.9
32
86
3
86
38
3
3
55
1.33

Tables:   1

The End!