Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005826.1 Hibiscus syriacus cultivar Beakdansim tig00013654_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103771

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2172--2227
5
11.6
5
92
7
82
0
0
16
83
0.64
7666--7710
19
2.4
19
92
0
72
71
2
15
11
1.24
14423--14471
18
2.8
18
84
3
55
30
22
16
30
1.96
20209--20305
23
4.4
21
76
13
81
28
24
19
26
1.99
23010--23169
65
2.5
63
84
9
189
33
21
16
27
1.95
41555--41729
90
2.0
89
90
3
280
37
11
6
44
1.67
47665--48287
4
156.2
4
97
0
1160
25
0
24
49
1.55
49618--49666
19
2.6
19
90
0
71
34
18
24
22
1.96
49596--49679
19
4.6
19
72
11
50
29
17
26
26
1.98
49670--49723
19
2.8
19
81
10
65
24
14
29
31
1.95
53959--54008
16
2.8
18
88
11
77
30
22
26
22
1.99
55968--56056
42
2.1
42
95
0
160
34
23
15
25
1.95
65560--65591
16
2.0
16
93
0
55
37
15
6
40
1.73
65999--66080
36
2.3
35
87
4
119
50
15
6
28
1.68
72215--72269
25
2.2
25
86
0
74
56
1
3
38
1.28
72229--72263
18
2.0
17
88
5
52
54
0
5
40
1.24
73463--73500
9
4.2
9
80
12
51
73
0
18
7
1.06
90650--90674
2
12.5
2
100
0
50
52
0
0
48
1.00
94864--94919
15
3.9
15
90
9
91
25
0
0
75
0.81
94864--94919
28
2.0
29
89
10
89
25
0
0
75
0.81
99132--99200
23
3.0
23
93
2
111
28
18
26
26
1.98
99191--99217
14
1.9
14
100
0
54
22
18
29
29
1.97

Tables:   1

The End!