Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005830.1 Hibiscus syriacus cultivar Beakdansim tig00013668_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126309

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13608--13632
12
2.1
12
100
0
50
28
8
24
40
1.83
15527--15552
3
8.7
3
100
0
52
34
0
65
0
0.93
16494--16525
14
2.1
16
88
11
50
71
28
0
0
0.86
22108--22182
38
2.0
37
82
5
89
49
2
1
46
1.24
24073--24141
23
3.0
23
89
0
102
26
26
27
20
1.99
30314--30376
31
2.0
31
87
6
92
38
23
19
19
1.93
31033--31253
64
3.5
64
85
3
250
27
18
19
34
1.95
35130--35286
64
2.5
63
87
4
208
27
18
19
34
1.95
44945--44970
9
2.9
9
100
0
52
7
11
0
80
0.89
57511--57550
19
2.0
20
85
4
55
32
0
7
60
1.25
57517--57568
20
2.5
21
81
6
61
34
0
1
63
1.06
58515--58559
21
2.2
21
92
7
76
37
8
4
48
1.55
64721--65322
303
2.0
301
99
0
1186
38
9
9
42
1.70
75546--75591
2
23.5
2
95
4
85
52
0
0
47
1.00
75662--75692
2
15.5
2
93
0
53
54
0
0
45
0.99
76887--77621
105
7.0
105
96
0
1328
23
18
25
33
1.97
86331--86359
10
2.9
10
100
0
58
79
0
0
20
0.74
87638--87674
2
18.5
2
100
0
74
51
0
0
48
1.00
89644--89779
21
6.5
21
79
9
136
29
24
22
24
1.99
89685--89815
62
2.1
62
83
8
160
30
22
21
25
1.99
99904--100033
65
2.0
65
98
0
251
29
17
18
34
1.94
103233--103265
16
2.1
16
100
0
66
57
24
12
6
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103335--103395
16
3.8
16
95
0
113
55
22
13
8
1.64
104143--104198
14
4.3
14
78
17
66
50
25
16
8
1.74
104123--104197
24
3.1
24
86
3
98
53
21
13
12
1.71
111870--111907
19
2.0
19
94
0
67
28
26
15
28
1.96

Tables:   1

The End!