Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005850.1 Hibiscus syriacus cultivar Beakdansim tig00013733_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61504

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3988--4025
17
2.2
18
86
13
53
0
15
7
76
1.01
4369--4437
33
2.1
33
83
5
86
31
1
36
30
1.67
4423--4519
13
8.0
12
72
22
62
28
3
37
30
1.73
4408--4520
36
3.2
36
92
1
174
27
3
36
32
1.74
10541--10566
5
5.2
5
100
0
52
80
0
19
0
0.71
13588--13638
24
2.1
24
85
0
66
37
11
17
33
1.86
18562--18633
36
2.0
36
94
0
126
27
5
34
31
1.80
23025--23101
36
2.1
36
85
4
102
33
5
32
28
1.79
25253--25321
33
2.1
33
83
5
86
33
1
34
30
1.67
25292--25404
36
3.2
36
88
1
156
28
3
34
33
1.74
25305--25404
13
8.3
12
70
19
57
30
3
35
32
1.73
29525--29579
23
2.4
23
96
0
101
30
3
36
29
1.75
36982--37039
19
3.0
19
78
14
57
63
0
15
20
1.30
39255--39306
21
2.6
21
90
6
81
32
13
7
46
1.72
39991--40039
17
2.9
17
82
17
59
77
6
12
4
1.09
61217--61320
54
1.9
53
90
7
165
45
5
15
33
1.70

Tables:   1

The End!