Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005856.1 Hibiscus syriacus cultivar Beakdansim tig00013752_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64758

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2556--2604
21
2.3
21
86
6
64
28
4
36
30
1.76
2575--2640
35
1.9
35
93
6
118
28
4
34
31
1.78
4445--4506
27
2.2
28
78
13
74
11
17
11
59
1.60
16617--16676
30
2.0
31
83
3
77
28
10
10
51
1.67
18647--18689
23
1.9
21
81
13
50
34
13
18
32
1.90
19836--19871
15
2.4
16
86
13
51
0
19
5
75
1.00
26663--26735
11
6.3
11
69
21
51
28
2
32
35
1.72
26649--26728
36
2.2
36
82
8
92
31
3
30
35
1.75
26667--26738
36
2.0
36
91
0
117
27
4
33
34
1.76
30592--30677
13
7.2
12
72
22
58
29
3
37
30
1.74
30574--30678
36
2.9
36
94
1
176
29
4
35
30
1.78
33807--33839
16
2.1
16
100
0
66
42
6
18
33
1.75
41454--41497
19
2.3
19
96
0
79
65
0
22
11
1.24
44699--44731
16
2.1
16
100
0
66
42
6
18
33
1.75
48236--48268
16
2.1
16
100
0
66
42
6
18
33
1.75
49363--49491
36
3.7
35
85
8
156
30
2
36
31
1.70
49394--49490
13
8.0
12
70
23
62
29
2
37
30
1.69
49379--49491
36
3.2
36
91
1
165
28
2
36
32
1.71
50947--51015
33
2.1
33
86
5
95
31
0
36
31
1.58
58025--58063
17
2.2
18
86
13
55
0
15
7
76
0.99
58408--58476
33
2.1
33
83
5
86
31
1
36
30
1.67
58462--58558
13
8.0
12
72
22
62
28
3
37
30
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58447--58559
36
3.2
36
92
1
174
27
3
36
32
1.74
64552--64577
5
5.2
5
100
0
52
80
0
19
0
0.71

Tables:   1

The End!