Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005858.1 Hibiscus syriacus cultivar Beakdansim tig00013768_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68589

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12339--12399
23
2.7
23
73
19
63
31
22
24
21
1.98
13079--13111
14
2.4
14
100
0
66
36
0
15
48
1.45
16337--16367
16
1.9
16
93
0
53
35
6
22
35
1.80
22204--22287
23
3.9
21
76
10
71
26
28
23
21
1.99
41585--41629
23
2.0
23
82
8
56
44
2
0
53
1.13
48927--48959
6
5.5
6
100
0
66
51
30
0
18
1.46
50065--50158
32
2.9
32
76
7
100
38
23
13
24
1.91
50381--50456
19
3.6
22
74
15
81
61
0
3
34
1.14
51015--51049
15
2.3
15
95
0
61
51
22
5
20
1.68
53705--53754
21
2.4
21
89
0
73
60
12
20
8
1.57
54071--54178
9
12.2
8
70
19
56
22
3
0
74
0.98
54058--54170
36
3.1
35
79
13
106
23
4
0
71
1.04
56771--56844
26
2.9
26
78
6
71
75
4
16
4
1.10
56781--56833
26
2.0
25
89
10
79
77
3
15
3
1.06
56789--56844
26
2.2
25
84
9
78
76
3
14
5
1.09
56905--57039
69
2.0
69
87
0
198
37
19
15
28
1.92
58598--58920
106
3.0
106
84
0
414
34
21
18
25
1.96
59173--59434
86
3.1
87
89
2
415
31
18
13
36
1.90
59445--59620
86
2.1
85
88
5
257
33
18
11
36
1.87
59141--59753
271
2.2
280
86
6
854
31
18
12
37
1.88
59259--59722
186
2.5
186
89
3
700
31
18
12
37
1.88
59529--59768
102
2.4
102
88
1
338
32
18
10
37
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59669--59746
37
2.1
37
82
2
102
29
20
10
39
1.85
59881--60002
35
3.4
35
82
6
147
27
18
13
39
1.89
60944--61108
37
4.6
36
75
19
134
29
1
0
67
1.05
61060--61151
9
10.3
9
70
17
59
17
4
0
78
0.91
60995--61149
4
37.8
4
69
14
50
24
3
0
72
1.00
61080--61206
43
2.9
44
77
13
136
14
7
1
76
1.08
61080--61191
9
12.7
9
73
17
60
14
8
0
76
1.05
61022--61191
53
3.3
51
79
10
150
20
5
0
73
1.07
61179--61233
26
2.2
25
87
9
76
18
9
1
70
1.22
63449--63491
20
2.1
21
91
4
70
39
9
9
41
1.69
64148--64186
17
2.3
17
86
8
53
51
0
2
46
1.14
66617--66659
2
21.5
2
100
0
86
51
0
0
48
1.00

Tables:   1

The End!