Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005859.1 Hibiscus syriacus cultivar Beakdansim tig00013771_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67836

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3995--4065
2
35.5
2
100
0
142
49
0
0
50
1.00
6769--6802
14
2.2
16
90
10
54
52
0
2
44
1.16
10193--10831
319
2.0
318
99
0
1260
38
19
16
25
1.92
20363--20407
19
2.4
19
89
10
67
20
2
4
73
1.11
40982--41561
287
2.0
289
94
2
1011
24
15
16
43
1.87
42110--42145
7
5.3
7
96
3
65
55
0
0
44
0.99
42641--42700
30
2.0
30
93
0
102
35
8
13
43
1.74
42640--42794
34
4.7
33
76
11
158
34
9
15
41
1.79
42788--42914
65
1.9
66
82
3
157
40
11
20
27
1.87
42863--43071
36
6.0
36
77
11
220
40
11
20
27
1.87
42806--43046
101
2.4
101
90
0
383
40
10
20
28
1.86
42990--43049
19
3.3
19
65
25
56
45
6
20
28
1.76
42881--43182
138
2.2
137
89
1
451
40
11
19
28
1.87
44549--44655
15
7.1
15
93
0
187
30
32
21
14
1.94
45277--45434
64
2.5
63
82
7
167
29
19
18
32
1.96
48942--49034
15
6.2
15
94
0
168
31
33
21
13
1.93
49656--49812
64
2.4
65
84
6
187
29
19
19
31
1.96
51319--51541
95
2.5
88
79
11
244
31
19
18
30
1.96
51376--51557
95
1.9
95
88
2
276
31
18
17
32
1.94
59319--59361
17
2.5
17
100
0
86
44
11
20
23
1.84

Tables:   1

The End!