Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000587.1 Hibiscus syriacus cultivar Beakdansim tig00001143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57666

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12932--12961
6
5.0
6
100
0
60
16
16
33
33
1.92
15293--15345
27
2.0
26
85
7
72
62
0
3
33
1.13
15351--15399
20
2.5
19
83
9
62
14
6
6
73
1.22
22422--22456
16
2.2
16
94
0
61
0
11
14
74
1.08
24821--24868
19
2.5
19
80
9
62
18
25
41
14
1.88
36095--36309
3
73.7
3
79
12
182
27
5
1
64
1.26
36166--36324
14
11.6
14
77
11
116
24
2
5
67
1.23
36153--36324
64
2.8
60
80
6
195
25
2
4
66
1.25
37076--37468
194
2.0
194
100
0
786
25
15
34
24
1.95
39593--40211
309
2.0
309
99
0
1229
27
15
16
40
1.88
40832--41078
122
2.0
122
96
0
449
32
16
19
31
1.94
43507--44070
306
1.9
298
88
4
862
25
21
16
36
1.94
50072--50097
13
2.0
13
100
0
52
38
15
46
0
1.46
55258--55290
17
1.9
17
100
0
66
30
15
0
54
1.41

Tables:   1

The End!