Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005875.1 Hibiscus syriacus cultivar Beakdansim tig00013805_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96188

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231--272
15
2.8
15
92
0
66
35
28
19
16
1.93
724--884
64
2.5
65
85
1
207
26
19
21
33
1.97
724--944
65
3.5
64
81
3
221
28
18
19
34
1.95
1916--1995
38
2.1
39
90
2
126
50
16
5
28
1.66
16384--16433
23
2.2
23
82
3
57
48
10
4
38
1.56
25654--25707
26
2.1
26
85
0
72
31
5
18
44
1.73
25882--25925
20
2.1
21
84
12
56
40
0
9
50
1.34
30186--30325
51
3.1
42
75
19
147
8
25
18
47
1.77
33100--33148
19
2.5
20
80
9
57
34
14
18
32
1.91
34601--34714
41
2.8
41
75
4
122
26
21
23
28
1.99
38050--38159
49
2.2
50
79
6
125
21
16
31
30
1.95
44211--44247
13
3.0
12
88
7
56
86
0
2
10
0.67
48639--48723
35
2.5
35
84
9
104
58
7
5
28
1.48
48639--48723
33
2.5
33
83
9
100
58
7
5
28
1.48
48818--48849
6
5.7
6
85
14
50
68
0
0
31
0.90
56351--56376
2
13.0
2
100
0
52
50
0
0
50
1.00
59874--59902
12
2.4
12
100
0
58
58
0
41
0
0.98
68247--68395
71
2.1
72
97
2
291
22
22
18
37
1.94
69915--69946
14
2.3
14
100
0
64
28
6
21
43
1.77
77402--77453
23
2.3
23
100
0
104
42
9
17
30
1.81
78450--78497
16
2.9
17
75
9
55
52
27
6
14
1.66
87891--88013
30
4.0
31
89
6
189
39
22
19
18
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89608--90173
245
2.3
250
90
3
937
22
24
18
34
1.97
89608--90176
126
4.6
125
92
2
952
22
24
18
33
1.97
90601--90666
33
2.0
34
90
3
107
37
4
6
51
1.47
91179--91248
21
3.3
20
88
5
86
22
25
32
18
1.97
93003--93061
19
3.1
19
75
4
57
64
0
0
35
0.94
93000--93062
27
2.4
26
86
2
90
65
0
0
34
0.93

Tables:   1

The End!