Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005878.1 Hibiscus syriacus cultivar Beakdansim tig00013810_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66778

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3424--3462
19
2.0
21
85
10
55
66
7
0
25
1.18
3980--4696
164
4.4
161
78
7
722
24
19
26
29
1.98
3987--4702
248
2.9
248
94
0
1229
24
19
26
29
1.98
3980--4737
84
9.2
84
77
6
647
24
19
26
30
1.98
9145--9184
20
2.0
21
90
5
64
62
0
15
22
1.32
17525--17583
23
2.6
23
94
0
100
23
45
18
11
1.83
20402--20691
150
1.9
150
84
2
386
44
13
21
20
1.86
22116--22247
8
16.5
8
99
0
255
25
11
25
38
1.89
23141--23182
20
2.1
19
83
12
57
59
4
0
35
1.19
26240--26264
13
1.9
13
100
0
50
48
0
0
52
1.00
35141--35409
138
2.0
137
81
3
317
29
16
27
26
1.97
35299--35521
113
2.0
113
83
0
284
30
17
25
26
1.97
35162--35656
250
2.0
251
81
7
576
28
16
26
28
1.97
35413--35923
138
3.7
138
79
2
535
26
15
27
30
1.96
36057--36171
36
3.4
35
71
24
111
41
12
18
27
1.86
35927--36180
66
3.9
65
84
3
339
41
12
16
29
1.85
36133--36174
21
2.0
20
86
4
57
47
16
16
19
1.83
36509--36617
37
3.0
36
85
4
146
35
11
21
31
1.89
58603--58673
32
2.2
32
89
0
124
71
14
7
7
1.28
64512--64557
20
2.3
20
96
0
83
34
39
13
13
1.83

Tables:   1

The End!