Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000588.1 Hibiscus syriacus cultivar Beakdansim tig00001144_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67674

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
482--636
63
2.5
64
78
12
162
34
20
19
26
1.96
1779--1906
32
4.1
31
77
10
125
30
17
19
32
1.95
1779--1881
31
3.3
31
76
12
111
33
16
17
33
1.92
1779--1906
63
2.0
62
85
8
170
30
17
19
32
1.95
6174--6300
31
4.1
31
78
8
123
30
17
20
31
1.95
7232--7260
14
2.1
14
93
6
51
34
3
13
48
1.60
15811--15991
29
6.2
29
94
0
299
35
7
26
30
1.83
21557--21788
111
2.1
112
92
1
394
37
8
9
44
1.69
23628--23667
21
1.9
21
100
0
80
30
20
37
12
1.89
23883--23967
35
2.5
33
76
14
82
27
7
10
55
1.60
27572--27687
49
2.3
49
83
1
133
25
29
30
15
1.96
27588--27687
49
2.0
49
86
0
137
25
30
30
15
1.95
44076--44177
49
2.1
49
98
0
195
16
17
0
64
1.34
45680--45710
2
15.5
2
100
0
62
51
0
0
48
1.00
48487--48529
2
21.5
2
100
0
86
51
0
0
48
1.00
49352--49407
26
2.1
27
83
9
71
33
0
3
62
1.12
50935--50982
13
3.5
13
73
15
51
66
16
4
12
1.39
50926--50982
29
1.9
30
96
3
107
63
17
7
12
1.50
60539--60564
5
5.2
5
100
0
52
38
0
0
61
0.96

Tables:   1

The End!