Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005889.1 Hibiscus syriacus cultivar Beakdansim tig00013829_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93020

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10131--10623
71
7.0
71
81
4
493
43
18
11
26
1.84
10131--10623
142
3.5
141
82
4
543
43
18
11
26
1.84
10134--10623
213
2.3
208
81
3
572
43
18
11
26
1.84
10741--10780
20
1.9
22
90
10
66
25
17
17
40
1.91
17336--17369
2
17.0
2
100
0
68
50
0
0
50
1.00
17653--17756
39
2.6
39
86
1
145
50
10
14
24
1.74
25376--25416
21
2.0
21
90
0
64
31
4
19
43
1.72
36619--36651
16
2.1
16
94
0
57
33
27
6
33
1.81
40589--40620
14
2.1
16
88
11
50
12
12
6
68
1.37
47053--47078
2
13.0
2
100
0
52
0
50
0
50
1.00
54279--54322
23
1.9
23
95
0
79
34
9
11
45
1.72
62988--63032
20
2.2
20
92
0
72
44
0
13
42
1.43
72651--72683
2
16.5
2
100
0
66
51
0
0
48
1.00
72902--72929
2
14.0
2
100
0
56
50
0
0
50
1.00
74441--74530
38
2.5
35
84
14
103
26
38
23
11
1.88
74730--74811
34
2.3
36
81
10
89
36
32
12
18
1.88
75651--75697
21
2.1
22
81
18
53
31
0
0
68
0.90

Tables:   1

The End!