Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000589.1 Hibiscus syriacus cultivar Beakdansim tig00001145_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60900

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1535--1690
78
2.0
78
97
0
294
13
30
21
34
1.92
3533--3565
15
2.2
16
89
10
52
63
0
0
36
0.95
5704--5752
17
2.9
16
79
8
62
36
4
0
59
1.17
6175--6217
15
2.8
15
85
3
50
55
4
2
37
1.33
7161--7212
27
1.9
27
84
7
70
53
5
0
40
1.25
9475--9513
20
2.1
19
90
9
62
38
5
10
46
1.60
11819--11859
15
2.6
15
88
7
55
29
9
24
36
1.87
13673--14074
42
9.7
43
84
8
464
28
21
18
32
1.97
13669--14074
83
4.9
83
85
6
484
28
21
18
32
1.96
13670--14074
125
3.3
125
88
4
579
28
21
18
32
1.96
16227--16285
21
2.8
21
84
0
73
18
5
20
55
1.61
16438--16662
43
5.3
42
86
5
290
28
24
21
26
1.99
16438--16658
85
2.6
86
86
2
293
28
24
21
25
1.99
17457--17496
18
2.2
18
90
0
62
45
12
35
7
1.70
22424--22538
60
1.9
60
89
0
176
57
5
7
29
1.49
40492--40678
83
2.3
83
95
0
338
36
8
21
33
1.83
40768--40904
29
4.7
29
74
17
113
52
0
4
42
1.26
40996--41078
29
2.8
29
82
10
98
60
3
3
32
1.31
41725--41778
21
2.6
21
83
11
67
40
1
1
55
1.21
45388--45437
20
2.5
20
90
3
73
16
4
10
70
1.30
45388--45444
20
2.7
22
81
13
66
15
3
10
70
1.29
48265--48633
189
2.0
188
93
0
639
25
21
18
34
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60378--60423
24
1.9
24
82
8
58
50
6
13
30
1.66

Tables:   1

The End!