Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005897.1 Hibiscus syriacus cultivar Beakdansim tig00013848_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70922

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
828--884
21
2.7
21
94
5
98
26
14
19
40
1.89
11690--11715
10
2.6
10
100
0
52
42
0
7
50
1.31
12866--12893
3
9.3
3
100
0
56
0
67
0
32
0.91
28578--28626
22
2.2
22
96
0
89
28
0
10
61
1.29
29346--29389
17
2.6
17
96
0
79
22
0
22
54
1.45
37342--37521
65
2.8
64
80
5
193
29
16
24
29
1.97
37427--37549
64
1.9
64
85
3
167
32
17
20
30
1.95
37884--37923
19
2.0
20
85
9
55
25
37
0
37
1.56
39191--39293
43
2.3
44
82
9
138
28
21
28
22
1.99
45077--45255
64
2.8
63
82
8
209
29
17
24
29
1.97
45097--45283
64
2.9
65
79
7
195
29
16
22
31
1.96
53153--53225
21
3.5
21
87
7
103
17
30
26
26
1.98
53738--53804
34
2.0
34
90
0
107
50
5
4
38
1.47
54234--54813
127
4.6
127
94
0
1007
33
18
24
22
1.97
56424--56548
31
4.0
31
91
2
198
17
19
24
39
1.92
60995--61027
16
2.1
16
100
0
66
36
27
18
18
1.94
61837--61909
32
2.3
31
85
2
85
45
4
4
46
1.41
67096--67147
23
2.3
23
100
0
104
30
17
9
42
1.81

Tables:   1

The End!