Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005898.1 Hibiscus syriacus cultivar Beakdansim tig00013849_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105082

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10127--10178
24
2.2
24
86
6
70
23
32
25
19
1.97
23274--23307
11
3.1
11
87
12
52
38
0
0
61
0.96
23660--23699
19
2.1
19
85
0
53
70
2
0
27
1.01
26114--26156
19
2.1
21
91
8
72
27
0
0
72
0.85
26121--26163
19
2.2
20
87
4
61
39
0
0
60
0.97
29474--29531
3
19.3
3
85
7
82
62
1
0
36
1.06
29656--30526
76
11.5
76
98
0
1683
35
21
20
21
1.96
31216--31270
22
2.5
22
93
0
101
40
14
10
34
1.81
31637--31757
54
2.3
54
91
1
190
23
19
15
40
1.90
33794--34033
115
2.1
114
87
0
345
31
21
14
32
1.93
38670--38709
21
1.9
21
94
0
71
55
10
12
22
1.67
40741--40778
15
2.8
13
88
11
51
68
2
5
23
1.23
42953--43026
15
5.1
14
76
19
55
58
1
0
40
1.07
42960--43024
3
21.0
3
81
6
76
60
1
0
38
1.07
42995--43030
18
2.0
18
94
0
63
58
0
0
41
0.98
52852--52943
41
2.2
41
92
0
166
31
15
11
41
1.83
52891--53028
63
2.2
63
94
0
249
33
12
12
42
1.80
58357--58530
41
4.2
41
94
0
312
30
16
12
40
1.86
60100--60211
30
3.8
29
91
5
179
44
7
29
18
1.76
62586--62613
2
14.0
2
100
0
56
50
0
0
50
1.00
70804--70873
34
2.1
32
89
5
104
21
31
15
31
1.95
71156--71197
21
2.0
21
95
0
75
26
28
21
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71303--71369
19
3.5
19
87
0
80
35
11
10
41
1.76
71434--71524
31
3.0
31
96
3
168
42
17
6
32
1.75
71683--71729
22
2.1
22
96
0
85
34
2
8
55
1.42
73703--73772
34
2.1
32
89
5
104
21
31
15
31
1.95
74055--74096
21
2.0
21
95
0
75
26
28
21
23
1.99
74185--74235
19
2.7
19
93
0
84
39
11
7
41
1.71
74300--74390
31
3.0
31
96
3
168
42
17
6
32
1.75
75055--75239
101
1.8
100
79
7
214
36
30
12
20
1.90
78363--78400
5
7.4
5
85
14
51
76
5
0
18
0.97
78495--78536
20
2.2
20
88
12
63
73
0
0
26
0.83
78495--78549
17
2.7
21
84
15
64
69
0
0
30
0.89
84348--84751
202
2.0
202
98
0
772
28
13
27
29
1.94

Tables:   1

The End!