Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000590.1 Hibiscus syriacus cultivar Beakdansim tig00001146_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55515

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64--104
18
2.3
18
80
16
50
43
2
0
53
1.13
9220--9270
21
2.4
22
90
6
79
37
13
37
11
1.82
20335--20377
21
2.0
22
86
4
61
46
2
4
46
1.36
21273--21327
18
2.8
20
83
8
69
38
1
3
56
1.28
21279--21327
20
2.6
18
87
6
62
34
2
4
59
1.28
27636--27667
16
2.0
16
100
0
64
18
12
31
37
1.88
28556--28616
3
21.0
3
77
12
56
27
4
1
65
1.22
36369--36467
36
2.8
35
83
6
128
35
18
14
32
1.90
36441--36726
106
2.7
105
89
5
436
33
14
11
39
1.83
36951--37128
94
1.9
93
80
8
207
29
17
12
41
1.86
37240--37314
36
2.1
36
82
9
91
25
17
12
45
1.82
37233--37350
63
1.9
62
86
8
168
27
16
11
43
1.84
37445--37766
40
7.6
40
72
15
211
24
31
19
24
1.98
37531--37714
46
4.2
45
73
14
179
25
29
18
26
1.98
37427--37781
128
2.8
128
92
3
563
24
31
19
24
1.98
37476--37808
43
7.8
43
72
11
227
24
30
20
24
1.98
37974--38034
3
21.0
3
77
12
56
27
4
1
65
1.22
40621--40658
15
2.5
15
80
16
51
42
2
2
52
1.29
46146--46184
12
3.2
12
85
3
51
17
0
7
74
1.05
47538--47707
23
7.5
23
82
6
195
48
1
28
22
1.58
47538--47709
45
3.8
44
78
10
177
47
1
28
22
1.59
47537--47707
68
2.5
68
84
8
231
48
1
28
22
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50624--50664
16
2.4
17
80
19
50
60
0
0
39
0.96
51126--51176
21
2.4
21
100
0
102
52
0
0
47
1.00
50876--51423
267
2.0
267
86
7
768
41
17
11
29
1.84

Tables:   1

The End!