Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005909.1 Hibiscus syriacus cultivar Beakdansim tig00013879_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63722

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7078--7163
31
2.8
31
85
5
113
24
18
6
50
1.72
8815--8844
13
2.4
12
94
5
51
13
0
0
86
0.57
8815--8844
6
4.8
6
92
8
51
13
0
0
86
0.57
9223--9257
16
2.2
16
89
0
52
2
31
0
65
1.07
10340--10388
23
2.2
22
81
3
53
28
24
22
24
1.99
10416--10630
100
2.1
102
93
2
362
36
23
13
26
1.92
13363--13401
20
2.0
20
90
5
62
35
30
2
30
1.71
19868--19916
20
2.4
20
82
3
62
20
20
26
32
1.97
20193--20244
20
2.6
20
93
0
86
26
21
15
36
1.93
29188--29225
20
1.9
20
88
0
58
26
34
26
13
1.93
31947--31998
20
2.6
20
85
11
79
11
36
26
25
1.90
37678--37758
31
2.6
32
86
2
101
23
16
9
50
1.74
41202--41241
20
2.0
20
90
0
62
35
32
2
30
1.71
56054--56130
20
3.8
20
83
8
93
22
18
27
32
1.97
56054--56131
41
1.9
41
89
5
122
21
17
28
32
1.96

Tables:   1

The End!