Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000591.1 Hibiscus syriacus cultivar Beakdansim tig00001147_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60970

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5386--5417
2
16.0
2
100
0
64
50
0
50
0
1.00
16920--16962
14
3.0
14
82
3
50
11
48
4
34
1.60
17017--17075
12
5.2
12
74
15
54
3
23
0
72
0.99
17196--17227
16
2.0
16
100
0
64
31
25
12
31
1.92
22683--22735
27
2.1
25
86
10
72
33
0
11
54
1.36
32055--32089
18
2.1
18
89
10
56
48
2
0
48
1.16
40395--40423
11
2.6
11
100
0
58
58
17
13
10
1.62
45110--45167
29
2.0
29
89
0
89
13
36
27
22
1.92
45213--45250
13
2.8
14
92
4
60
28
39
23
7
1.83
45325--45381
29
2.0
29
92
0
96
21
33
35
10
1.87
46948--47253
150
2.0
149
94
0
540
35
20
16
27
1.94
56917--56964
2
24.5
2
95
4
89
50
0
0
50
1.00

Tables:   1

The End!