Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005912.1 Hibiscus syriacus cultivar Beakdansim tig00013883_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72670

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7887--7924
20
1.9
20
100
0
76
18
21
31
28
1.97
7838--8012
74
2.3
76
82
10
218
21
20
27
30
1.98
7882--8023
76
1.9
74
86
5
205
20
21
29
28
1.98
9365--9613
134
1.8
135
86
5
360
31
16
22
30
1.95
12000--12046
19
2.5
19
96
0
85
63
4
14
17
1.45
17552--17644
3
30.3
3
76
8
89
60
0
2
37
1.09
17820--18667
134
6.3
134
79
4
753
31
14
20
33
1.93
17818--18667
268
3.2
266
80
5
897
31
14
20
33
1.93
22773--22842
23
3.0
23
74
0
68
32
27
1
38
1.66
23048--23188
42
3.3
42
80
3
138
38
22
16
22
1.93
23056--23188
21
6.2
21
72
3
104
39
22
15
21
1.91
23991--24060
35
2.0
35
86
5
97
28
28
15
27
1.96
25035--25092
15
3.8
15
80
11
64
1
24
0
74
0.92
25037--25098
24
2.6
24
82
5
63
3
20
0
75
0.94
29389--29502
56
2.0
58
83
6
144
34
10
22
32
1.88
30219--30270
16
3.4
16
73
26
51
65
7
0
26
1.20
31381--31405
13
1.9
13
100
0
50
0
8
40
52
1.31
31461--31517
20
2.7
21
83
5
71
54
0
1
43
1.10
31456--31527
20
3.3
20
72
22
65
56
0
1
41
1.07
33026--33054
2
14.5
2
100
0
58
51
0
0
48
1.00
36042--36082
15
2.7
16
85
7
50
24
29
19
26
1.98
41817--41858
19
2.1
21
79
16
54
80
9
9
0
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41819--41858
21
1.9
21
89
0
62
80
10
10
0
0.92
48931--48960
15
2.0
15
93
0
51
26
20
30
23
1.98
49486--49524
20
2.0
20
100
0
78
30
15
25
28
1.96
49487--49536
20
2.5
20
90
0
73
34
16
22
28
1.95
49284--52445
258
11.7
256
67
17
1073
34
16
15
32
1.91
50047--50143
42
2.3
42
85
1
133
32
23
20
22
1.98
50214--50249
16
2.3
16
95
4
65
61
0
0
38
0.96
51130--51232
42
2.5
42
85
1
145
33
22
22
22
1.98
51303--51338
16
2.3
16
95
4
65
61
0
0
38
0.96
52214--52316
42
2.5
42
84
7
147
33
21
21
23
1.97
56651--56703
20
2.7
20
81
0
61
24
32
15
28
1.95
56768--56816
15
2.9
16
85
11
55
24
28
26
20
1.99
59891--59947
18
3.1
18
81
16
71
31
8
8
50
1.64
59891--59938
18
2.4
21
90
10
75
35
10
8
45
1.68
60171--60224
20
2.7
20
88
0
81
24
31
18
25
1.97
60310--60345
15
2.4
15
90
0
54
27
22
25
25
2.00
60724--60794
34
2.1
33
86
2
97
32
15
29
22
1.95
71963--72126
67
2.4
67
84
2
204
25
18
14
42
1.88
72240--72266
14
1.9
14
100
0
54
51
7
7
33
1.58
72233--72266
14
2.5
13
86
9
50
50
8
5
35
1.58

Tables:   1

The End!