Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005917.1 Hibiscus syriacus cultivar Beakdansim tig00013895_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64311

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4394--4436
2
21.5
2
100
0
86
0
48
0
51
1.00
8817--8906
39
2.3
39
94
1
162
28
11
31
28
1.91
19683--19798
24
4.8
24
82
7
110
29
12
18
40
1.86
19692--19798
48
2.2
48
85
6
137
28
11
19
40
1.86
32519--32543
10
2.5
10
100
0
50
92
0
8
0
0.40
36636--36689
21
2.6
21
91
2
92
16
25
42
14
1.87
42293--42335
22
1.9
23
95
4
79
13
25
34
25
1.93
42218--42415
75
2.6
76
86
3
265
19
24
32
22
1.97
43016--43059
17
2.6
17
89
7
63
59
27
0
13
1.35
44989--45073
20
4.1
20
73
15
64
16
25
35
22
1.95
48882--48921
21
1.9
21
85
10
55
35
10
2
52
1.48
50846--51035
75
2.5
76
88
5
280
18
24
32
23
1.97
55089--55113
12
2.1
12
100
0
50
48
0
0
52
1.00
55043--55132
42
2.2
43
78
9
107
50
0
1
48
1.08
56095--56160
29
2.3
29
100
0
132
25
31
22
19
1.98
56109--56157
14
3.4
14
72
5
53
22
30
26
20
1.98
56095--56143
15
3.3
15
71
5
55
28
28
22
20
1.98
61138--61180
10
4.2
10
81
3
50
69
2
2
25
1.12
61570--61635
29
2.2
29
82
12
73
40
3
1
54
1.25
61704--61751
10
4.7
10
79
5
51
22
4
4
68
1.24

Tables:   1

The End!