Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005920.1 Hibiscus syriacus cultivar Beakdansim tig00013898_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68407

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1378--1465
32
2.7
32
82
10
90
71
1
4
22
1.11
1403--1476
32
2.3
30
80
11
85
70
1
4
24
1.13
1796--1881
33
2.6
32
83
7
118
25
10
22
41
1.85
1930--1992
12
5.3
11
75
21
56
71
0
0
28
0.86
1930--1991
32
2.0
31
87
9
90
70
0
0
29
0.87
2734--2779
22
2.0
22
84
12
58
63
0
0
36
0.95
4670--4755
32
2.6
31
83
8
93
30
3
4
61
1.33
7864--7928
29
2.2
30
83
5
87
35
12
24
27
1.91
11318--11352
18
1.9
18
88
0
52
25
34
14
25
1.94
17913--17977
3
21.0
3
81
6
76
40
0
0
60
0.97
26775--26963
93
2.0
92
85
5
256
29
13
19
37
1.90
29245--29365
54
2.3
54
85
1
154
42
15
19
23
1.89
30498--31369
76
11.5
76
97
0
1618
21
20
21
35
1.96
31499--31563
3
21.0
3
81
6
76
40
0
0
60
0.97
31499--31570
24
2.9
24
87
6
99
41
0
0
58
0.98
32331--32355
13
1.9
13
100
0
50
8
32
52
8
1.60
36045--36296
126
2.0
126
93
0
432
29
27
16
26
1.97
37654--37699
21
2.2
21
88
0
65
26
13
8
52
1.69
41871--42126
45
5.7
45
95
0
442
30
21
7
40
1.81
42056--42125
21
3.2
21
64
28
56
28
20
10
41
1.84
56661--56701
20
2.0
20
95
0
73
39
21
19
19
1.93

Tables:   1

The End!