Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005922.1 Hibiscus syriacus cultivar Beakdansim tig00013901_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73124

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2038--2124
43
2.0
43
86
0
120
24
24
16
35
1.94
6294--6613
158
2.0
159
91
0
516
30
15
12
40
1.85
13902--13981
23
3.7
21
78
15
74
25
27
25
22
2.00
13903--13968
23
2.9
22
84
6
78
22
28
24
24
1.99
23462--23503
11
3.8
11
96
0
75
16
14
38
30
1.89
23918--24038
67
1.9
65
83
14
164
57
0
2
39
1.12
23952--24018
27
2.4
28
80
10
73
58
0
1
40
1.07
24298--24336
16
2.4
16
86
0
51
33
0
0
66
0.92
24490--24534
21
2.2
20
84
4
54
62
0
2
35
1.08
25252--25278
2
13.5
2
100
0
54
48
0
0
51
1.00
32149--32186
15
2.6
15
83
4
51
60
0
2
36
1.11
32218--32279
19
3.3
17
73
20
52
56
4
3
35
1.37
32234--32286
19
2.8
19
73
0
52
56
1
3
37
1.28
36555--36611
16
3.6
16
90
2
89
35
10
22
31
1.88
42689--42892
41
5.4
35
88
9
182
23
26
11
38
1.89
42719--42886
41
4.1
41
98
0
318
22
28
11
37
1.89
43841--43867
3
9.0
3
100
0
54
33
0
0
66
0.92
60201--60230
3
10.0
3
92
0
51
63
3
0
33
1.11
68952--69080
30
4.3
29
86
6
168
18
23
44
13
1.84
71706--71767
31
2.2
28
83
13
74
29
29
22
19
1.98

Tables:   1

The End!