Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005934.1 Hibiscus syriacus cultivar Beakdansim tig00013931_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89648

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--100
39
2.2
39
97
0
163
10
23
8
58
1.58
2126--2208
41
2.0
41
97
0
157
34
18
21
25
1.96
6413--6465
25
2.1
25
96
0
97
50
9
7
32
1.62
15663--15696
16
2.1
16
88
0
50
50
0
2
47
1.16
15738--15771
16
2.0
18
88
11
54
26
2
5
64
1.30
16239--16486
130
1.9
130
93
0
424
35
12
15
36
1.86
16884--16959
35
2.2
35
92
0
125
35
1
23
39
1.63
36916--37025
29
3.8
29
77
8
107
42
3
0
53
1.18
37045--37086
22
1.9
22
85
0
57
35
2
11
50
1.52
37958--38025
31
2.2
31
94
0
118
50
11
8
29
1.69
42205--42272
34
2.0
34
100
0
136
35
23
20
20
1.96
46566--46637
37
2.0
36
83
8
92
72
0
8
19
1.10
46870--46933
2
34.0
2
80
17
75
54
0
1
43
1.09
46882--46944
31
2.0
31
84
3
81
58
4
1
34
1.29
49016--49226
106
2.0
106
88
1
316
22
17
24
36
1.94
50351--50398
8
5.6
8
83
9
51
6
2
4
87
0.73
59808--59849
14
3.1
14
86
6
52
76
2
2
19
1.01
59802--59844
22
2.0
22
90
0
68
76
2
2
18
1.00
61094--61145
2
28.0
2
76
21
51
55
0
1
42
1.10
62377--62449
2
38.5
2
85
10
100
50
0
1
47
1.09
64322--64503
56
3.3
55
75
12
147
41
14
14
29
1.85
65042--65087
23
2.0
23
91
0
74
43
2
0
54
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65049--65095
23
2.0
23
83
4
58
48
0
2
48
1.13
69330--69405
31
2.4
31
76
10
82
15
23
30
30
1.96
81202--81290
13
6.9
12
74
14
54
59
1
2
37
1.17
81211--81288
18
4.4
16
71
21
57
60
1
1
37
1.13
81262--81302
22
1.9
22
90
5
66
60
2
2
34
1.23
83967--84036
20
3.5
20
84
5
72
32
17
11
38
1.85

Tables:   1

The End!