Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005940.1 Hibiscus syriacus cultivar Beakdansim tig00013950_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87207

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7860--7913
23
2.5
21
77
16
56
59
1
1
37
1.19
7842--7920
21
3.6
21
70
21
54
54
6
1
37
1.34
8582--8671
39
2.3
39
79
11
112
37
17
1
43
1.57
8582--8687
39
2.7
39
76
13
110
37
16
1
44
1.58
8912--8964
24
2.1
26
86
13
76
37
5
0
56
1.23
15556--15625
23
3.2
23
62
25
60
41
15
25
17
1.89
15560--15627
21
3.2
21
62
25
52
42
16
25
16
1.87
15541--15635
43
2.2
43
96
0
172
40
12
28
18
1.88
16916--16975
20
2.9
21
78
19
63
33
0
10
56
1.32
18819--18870
26
2.0
26
85
7
70
34
1
1
61
1.18
19313--19373
30
2.0
30
90
0
95
27
19
32
19
1.96
25836--25872
19
2.0
18
94
5
65
0
27
5
67
1.12
26608--26657
18
2.6
20
78
15
52
32
18
26
24
1.97
27815--27849
17
2.1
17
88
0
52
45
11
2
40
1.55
28333--28390
30
1.9
30
89
0
89
37
22
13
25
1.91
28966--29021
19
2.9
19
91
0
85
30
23
16
30
1.96
31654--31689
2
18.0
2
100
0
72
50
0
0
50
1.00
33597--33631
17
2.1
17
88
0
52
45
11
2
40
1.55
34806--34864
30
2.0
30
86
6
84
38
8
18
33
1.81
34809--34874
30
2.2
30
81
10
73
43
10
16
28
1.81
36962--37013
22
2.4
22
93
0
86
21
21
15
42
1.89
44506--44562
3
18.7
3
82
10
71
38
0
0
61
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46245--46405
30
5.4
30
78
10
143
17
14
8
60
1.57
46254--46433
59
3.0
60
77
8
181
18
14
8
57
1.63
47752--47804
14
4.0
13
76
11
54
49
5
5
39
1.50
49635--49820
75
2.5
75
86
1
246
24
30
23
21
1.99
57095--57135
16
2.7
15
85
7
55
17
0
26
56
1.41
57736--57921
75
2.5
75
86
1
246
24
30
23
21
1.99
61288--61673
183
2.1
184
91
3
620
42
3
8
46
1.49
63738--63767
3
10.0
3
100
0
60
33
0
0
66
0.92
72072--72147
3
24.0
3
91
2
53
46
0
0
53
1.00
72095--72142
25
2.1
21
85
14
60
45
0
0
54
0.99
84858--84922
1
65.0
1
81
0
76
90
0
9
0
0.44
84855--84923
11
6.3
11
88
8
97
88
0
11
0
0.52
84858--84922
26
2.5
26
94
0
112
90
0
9
0
0.44
85893--86170
89
3.1
89
94
5
506
27
16
20
34
1.95
86076--86383
111
2.8
114
91
4
495
32
15
21
30
1.94

Tables:   1

The End!