Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005944.1 Hibiscus syriacus cultivar Beakdansim tig00013958_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43480

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1832--2992
207
5.6
209
74
8
555
37
16
16
30
1.91
2000--2991
413
2.4
416
77
7
995
37
16
16
29
1.91
4526--4821
54
5.8
52
76
11
224
27
18
19
34
1.95
4601--4718
50
2.3
51
87
10
161
25
18
20
35
1.95
4531--4821
103
2.9
99
79
7
275
27
18
19
34
1.95
4643--4815
53
3.5
49
75
14
169
26
16
20
36
1.94
6396--6448
20
2.7
19
85
5
61
41
15
28
15
1.87
10558--10608
20
2.5
20
87
6
68
35
17
29
17
1.93
10629--10700
22
3.5
20
81
9
83
25
16
29
29
1.97
11038--11576
56
9.7
56
91
0
839
36
11
19
33
1.87
13072--20343
4
1812.0
4
88
3
9487
45
25
4
24
1.73
13416--13455
18
2.2
18
95
0
71
25
27
22
25
2.00
23341--25767
211
11.5
211
82
2
2632
35
17
17
29
1.93
28507--28916
211
1.9
211
83
2
520
34
16
20
29
1.94
31645--31825
45
4.1
43
79
9
163
26
16
5
51
1.66
31690--31825
44
3.1
44
84
5
150
24
17
5
52
1.64
32614--32658
23
2.0
23
90
0
72
40
15
4
40
1.67
35199--35296
51
1.9
51
97
0
187
39
22
6
31
1.78
41259--41552
152
1.9
152
93
1
500
25
24
20
29
1.99
41889--41969
29
2.9
29
81
5
87
43
8
17
30
1.79
41978--42025
24
2.0
24
84
8
62
52
8
2
37
1.44

Tables:   1

The End!