Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005952.1 Hibiscus syriacus cultivar Beakdansim tig00013983_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56313

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4663--4825
59
2.8
58
82
4
202
40
5
20
33
1.76
6439--6479
20
2.0
20
100
0
82
24
4
34
36
1.77
10500--10560
31
2.0
29
84
9
77
39
21
14
24
1.91
10509--10638
67
1.9
67
85
3
181
42
17
13
26
1.87
16831--16967
45
3.0
45
83
7
179
32
16
7
43
1.76
19072--19117
20
2.2
20
88
3
65
34
15
10
39
1.82
23759--23937
46
4.0
46
89
2
274
31
21
7
39
1.80
23772--23937
90
1.8
91
93
3
291
31
21
7
39
1.82
29126--29266
70
2.0
70
100
0
282
46
17
12
24
1.82
32152--32192
18
2.3
18
95
0
73
39
12
41
7
1.70
40423--40492
29
2.3
31
76
13
74
47
2
14
35
1.59
41330--41360
8
3.8
8
95
4
53
51
0
0
48
1.00
46813--46881
23
3.0
23
93
0
111
27
26
26
20
1.99
47177--47234
25
2.3
25
79
8
64
41
8
13
36
1.76

Tables:   1

The End!