Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005956.1 Hibiscus syriacus cultivar Beakdansim tig00013995_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67681

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1622--1693
24
3.0
24
95
0
126
43
13
11
31
1.80
2897--2954
30
2.0
30
83
10
75
34
18
8
37
1.82
8866--8986
23
5.1
23
71
24
83
31
36
4
28
1.76
8863--9003
36
3.9
36
97
0
257
30
36
4
28
1.78
8866--8986
11
10.2
11
71
23
86
31
36
4
28
1.76
12918--13023
34
3.0
36
93
5
189
30
34
5
29
1.80
21416--21470
22
2.5
22
93
0
92
40
16
20
23
1.91
21431--21485
22
2.5
22
84
0
65
41
18
16
23
1.89
33453--33519
31
2.2
30
94
2
116
44
10
23
20
1.82
39627--39677
19
2.6
20
93
3
86
47
7
11
33
1.69
44564--44600
18
2.0
20
89
10
60
75
2
18
2
1.04
46826--46866
21
1.9
22
85
5
57
34
21
17
26
1.95
48687--48738
26
2.1
23
82
10
59
19
13
0
67
1.23
65776--65826
24
2.1
24
85
0
66
33
17
11
37
1.86

Tables:   1

The End!