Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000596.1 Hibiscus syriacus cultivar Beakdansim tig00001152_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42868

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--106
26
4.0
26
75
12
118
45
10
24
20
1.81
6226--6264
17
2.3
17
95
0
69
28
10
33
28
1.90
6394--6448
20
2.8
20
97
0
101
32
10
30
25
1.90
6843--7018
46
3.8
46
92
3
275
45
10
22
22
1.82
6897--7010
20
4.9
25
67
23
95
44
11
23
20
1.83
7001--7035
17
2.1
17
100
0
70
34
11
22
31
1.90
6909--7111
109
1.9
110
91
3
338
41
10
25
21
1.85
6955--7099
63
2.2
63
86
7
202
39
11
26
22
1.88
7838--7878
19
2.2
18
86
4
55
48
2
0
48
1.14
8138--8293
42
3.7
42
85
1
206
30
17
23
28
1.97
8138--8293
84
1.9
84
87
2
233
30
17
23
28
1.97
8230--8657
203
2.1
202
81
4
508
28
19
18
33
1.96
8522--9010
118
4.1
118
80
5
472
26
21
15
36
1.93
11502--11542
19
2.1
19
86
13
57
9
12
0
78
0.98
11489--11555
26
2.4
29
85
12
95
10
16
0
73
1.10
17732--17772
17
2.4
17
88
8
57
31
19
7
41
1.79
27863--28306
2
226.5
2
69
15
171
43
6
4
44
1.51
29533--29571
16
2.4
16
86
4
51
38
2
2
56
1.27
31004--31082
41
1.9
41
84
7
106
46
0
1
51
1.08
31561--31731
2
85.5
2
89
4
265
47
2
1
49
1.22
35814--35901
29
3.0
29
88
0
122
40
23
4
30
1.75
35913--35951
13
3.0
13
84
0
51
20
20
41
17
1.91

Tables:   1

The End!